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Alexander, M. and K. M. Scow.  1989.  Kinetics of biodegradation in soil, p. 243-269. In. B. L. Sawhney and K. Brown (ed.) Reactions and movement of organic chemicals in soil.  Soil Science Society of America Special Symposium Publication 22, Madison, WI.

Andrews, S.S.; Mitchell, J.P.; Mancinelli, R.; Karlen, D.L.; Hartz, T.K.; Horwath, W.R.; Pettygrove, G.S; Scow, K.M.; Munk, D.S.  (2002).  On-farm assessment of soil quality in California's central valley.  Agron. J. 94:12-23.

Basagaoglu H. E.E. Chung. D. Gandhi, K.M. Scow,  B.J. McCoy, T.R. Ginn. 2003. Rate parameters for methyl tert-butyl ether biodegradation via a radial diffusion model. Journal of Environmental Engineering-ASCE. 129:565-570.

Batten K.M and K.M. Scow.  2004. Sediment microbial community composition and methylmercury pollution at four mercury mine-impacted sites. Microb. Ecol. 46:429-441

Batten, K.M., Scow, K.M., Davies, K.F., and S.P. Harrison. 2006. Two invasive plants alter soil microbial community composition in serpentine grasslands. Biological Invasions 8:217-230.

Batten, KM, KM Scow, and EK Espeland. 2008. Soil microbial community associated with an invasive grass differentially impacts native plant communities. Microb Ecol. 55:220–228.

Batten, KM; Scow, KM; Davies, KF; Harrison, SP. 2006. Two invasive plants alter soil microbial community composition in serpentine grasslands. Biol. Invasions 8 (2): 217-230.

Batten, KM; Six, J; Scow, KM; Rillig, MC. 2005. Plant invasion of native grassland on serpentine soils has no major effects upon selected physical and biological properties. Soil Biol. Biochem. 37 (12): 2277-2282

Bossio, D.A., and K. M. Scow.  1998. Impact of carbon and flooding on PLFA profiles and substrate utilization patterns of soil microbial communities. Microb. Ecol. 35:265-278.

Bossio, D.A., and K.M. Scow.  1995.  Impact of carbon and flooding on the metabolic diversity of microbial communities in soil.  Appl. Environ. Microb. 61:4043-4050.

Bossio, D.A., and K.M. Scow.  1997.  Microbial ecology in agricultural ecosystems: impacts of management changes on the microbial community in a rice production system.  Cal. Agric. 51: 33-40.

Bossio, D.A., K. M. Scow, N. Gunapala, and K.J. Graham.  1998. Determinants of soil microbial communities: effects of agricultural management, season, and soil type on phospholipid fatty acid profiles. Microb. Ecol. 36:1-12

Bossio, DA; Fleck, JA; Scow, KM, et al. 2006. Alteration of soil microbial communities and water quality in restored wetlands. Soil Biol. Biochem. 38: 1223-1233.

Bossio, DA; Girvan, MS; Verchot, L; Bullimore, J; Borelli, T; Albrecht, A; Scow, KM; Ball, AS; Pretty, JN; Osborn, AM. 2005. Soil microbial community response to land use change in an agricultural landscape of Western Kenya. Microb. Ecol. 49 (1): 50-62.

Boulton A.M., B.A. Jaffee, Scow K.M. 2003. Effects of a common harvester ant (Messor andrei) on richness and abundance of soil biota. Applied Soil Ecology. 23:257-265..

Brown, F. A., Jr., and K. M. Scow.  1978.  Magnetic induction of a circadian cycle in hamsters.  J. Interdiscip. Cycle Res. 9: 137-145.

Bruns, M.A., and K.M. Scow.  1999.  DNA fingerprinting as a means to identify sources of soil-derived dust: problems and potential, p. 193-205.  In: Scow et al. (eds) Integrated assessment of ecosystem health.  Lewis Publishers, Boca Raton, FL.

Bruns, MA; Hanson, JR; Mefford, J; Scow, KM.  2001.  Isolate PM1 populations are dominant and novel methyl tert-butyl ether-degrading bacteria in compost biofilter enrichments.  Environ. Microbiol. 3:220-225.

Burger, M; Jackson, LE; Lundquist, EJ; Louie, DT; Miller, RL; Rolston, DE; Scow, KM. 2005. Microbial responses and nitrous oxide emissions during wetting and drying of organically and conventionally managed soil under tomatoes. Biol. Fertil. Soils 42 (2): 109-118.

Calderon, F.J., L.E. Jackson, K.M. Scow, and D.E. Rolston.  2000.  Microbial responses to simulated tillage in cultivated and uncultivated soils.  Soil Biol. Biochem. 32:1547-1559.

Calderon, FJ; L.E. Jackson; K.M. Scow; and D.E. Rolston.  2001.  Short-term dynamics of nitrogen, microbial activity, and phospholipid fatty acids after tillage.  Soil Sci. Soc. Amer. J.  65:118-126.

Cao, Y, GN Cherr, AL Cordova-Kreylos, et al. 2006. Relationships between sediment microbial communities and pollutants in two California salt marshes. Microb. Ecol. 52: 619-633.

Cavagnaro, T., L Jackson, & K. Scow. 2006. Climate Change: Challenges and Solutions for California Agricultural Landscapes. A Report from: California Climate Change Center. California Energy Commission. CEC-500-2005-189-SF.

Cavagnaro, T.R., Jackson, L.E., Six, J., Ferris, H., Goyal, S., Asami, D., and K.M. Scow. 2006. Arbuscular mycorrhizas, microbial communities, nutrient availability, and soil aggregates in organic tomato production. Plant Soil 282:209-225.

Cavagnaro, T.R., L.E. Jackson, K. Hristova, K.M. Scow. 2008. Short-term population dynamics of ammonia oxidizing bacteria in an agricultural soil. Applied Soil Ecology, 40 (1), pp. 13-18. 

Cavagnaro, TR, LE Jackson, KM Scow, and KR Hristova. 2007. Effects of arbuscular mycorrhizas on ammonia oxidizing bacteria in an organic farm soil. Microb. Ecol. 54:618-626.

Chen, J., H. Ferris, K.M. Scow, and K.J. Graham.  2001.  Fatty acid composition and dynamics of selected fungal-feeding nematodes and fungi.  Comp. Biochem. Physiol. Part B 130:135-144.

Chung, G.-Y., B.J. McCoy, and K.M. Scow.  1993.  Criteria to assess when biodegradation is kinetically limited by intraparticle diffusion and sorption. Biotechnol. and Bioeng. 41:625-632.

Clark, M.S., W.R. Horwath, C. Shennan, and K.M. Scow.  1998.  Changes in soil chemical properties resulting from organic and low-input farming practices.  Agron. J. 90:662-671.

Clark, M.S., W.R. Horwath, C. Shennan, C, K.M. Scow, W. T. Lanini, and H. Ferris.  1999.  Nitrogen, weeds and water as yield-limiting factors in conventional, low-input, and organic tomato systems.  Agric. Ecosyst. Environ. 73:257-270.

Cordova-Kreylos, A., Cao, Y., Green, P., Hwang, H., Kuivila, K.M., LaMontagne, M.G., Van de Werfhorst, L.C., Holden, P.A., and K.M. Scow. 2006. Diversity, composition, and geographical distribution of microbial communities in California salt marsh sediments. Appl. Environ. Microb. 72(5):3357-3366.

Cordova-Kreylos, AL and KM Scow, KM. 2007. Effects of ciprofloxacin on salt marsh sediment microbial communities. ISME J. 1:585-595  

Costello, A; Auman, A.; Macalady J; Scow K; Lidstrom M. Estimation of methanotroph abundance in a freshwater lake sediment. Environ. Micro 4:443-450.

Danyluk, MD, M Nozawa-Inoue, KR Hristova, KM Scow, BD Lampinen and LJ Harris. 2007. Survival and growth of Salmonella Enteritidis PT 30 in almond orchard soils. J. Appl. Microbiol. 104:1391-1399.

Deeb, R.A., H.Y. Hu, J. R. Hanson, K.M. Scow, and L. Alvarez-Cohen.  2000. Substrate interactions in BTEX and MTBE mixtures by an MTBE-degrading isolate.  Environ. Sci. Technol. 35:312-317.

Deeb, R.A., K.M. Scow, and L. Alvarez-Cohen.  2000.  Aerobic MTBE biodegradation:  An examination of past studies, current challenges and future research directions.  Biodegradation 11:171-186.

DeGrood, SH; Claassen, VP; Scow, KM. 2005. Microbial community composition on native and drastically disturbed serpentine soils. Soil Biol. Biochem. 37 (8): 1427-1435.

Dong, L., Córdova-Kreylos, A.L., Yang, J., Yuan, H., Scow, K.M. 2009. Humic acids buffer the effects of urea on soil ammonia oxidizers and potential nitrification. Soil Biology and Biochemistry, 41 (8), pp. 1612-1621. 

Drenovsky, R.E., M. P. Edwards, L. E. Gardner, K. M. Scow, A. L. Maroney, L. K. Loveless.  2004. Comparison of Soil Microbial Communities in Pinot Noir Vineyards in Carneros, Anderson, and Russian River Appellations.  Amer. J. Viticul. Enol.

Drenovsky, R.E., Steenwerth, K.L., Jackson, L.E., Scow, K.M.  2010. Land use and climatic factors structure regional patterns in soil microbial communities. Global Ecology and Biogeography, 19 (1), pp. 27-39.

Drenovsky, RE; Elliott, GN; Graham, KJ; Scow, KM. 2004. Comparison of phospholipid fatty acid (PLFA) and total soil fatty acid methyl esters (TSFAME) for characterizing soil microbial communities. Soil Biol. Biochem. 36 (11): 1793-1800.

Drenovsky, RE; Vo, D; Graham, KJ; Scow, KM. 2004. Soil water content and organic carbon availability are major determinants of soil microbial community composition. Microb. Ecol. 48 (3): 424-430.

duPlessis, C.A., K.A. Kinney, E.D. Schroeder, D.P.Y. Chang, and K.M. Scow.  1998. Denitrification and nitric oxide reduction in an aerobic toluene-treating biofilter.  Biotech. Bioeng. 58:408-415.

El-Farhan, Y., K.M. Scow, and D.E. Rolston.  2000.  Kinetics of trichloroethylene cometabolism and toluene biodegradation: model application to soil batch experiments.  J. Environ. Qual. 29:778-786.

El-Farhan, Y.H., D.E. Rolston, and K.M. Scow.  1999.  Coupling vapor transport and transformation of volatile organic chemicals, p. 235-259.  In: Hopmans, J., and M. Parlange (eds.) Vadose zone hydrology; cutting across disciplines.  Oxford University Press, New York.

El-Farhan, Y.H., K.M. Scow, L.W. deJonge, D.E. Rolston, and P. Moldrup.  1998.  Coupling transport and biodegradation of toluene and trichloroethylene in unsaturated soils.  Water Resources Res. 34:437-445.

Ergas, S.J., K. Kinney, M.E. Fuller, and K.M. Scow.  1994.  Modeling and characterization of a compost biofiltration system degrading dichloromethane.  Biotechnol. Bioengin.44:1048-1054

Eweis, J.B., E.D. Schroeder, D.P. Chang, and K.M. Scow.  1998.  Biodegradation of MTBE in a pilot-scale biofilter, p. 342-346.  In: Wickramanayake, G.B. and R.E. Hinchee (eds).  Natural attenuation.  Chlorinated and recalcitrant compounds.  Batelle Press, Columbus, Ohio.

Fan, S., and K.M. Scow.  1993.  Biodegradation of TCE and toluene by indigenous microbial populations in soil.  Appl. Environ. Microbiol. 59:1911-1918.

Feris, K., Mackay, D., de Sieyes, N., Chakraborty I, Einarson M, Hristova K, Scow K.  2008. Effect of ethanol on microbial community structure and function during natural attenuation of benzene, toluene, and o-xylene in a sulfate-reducing aquifer. Environ Sci Technol. 2008 Apr 1;42(7):2289-94.

Feris, KP; Hristova, K; Gebreyesus, B; Mackay, D; Scow, KM. 2004. A shallow BTEX and MTBE contaminated aquifer supports a diverse microbial community. Microb. Ecol. 48 (4): 589-600.

Ferris, H., R.C. Venette, and K.M. Scow. 2004. Soil management to enhance bacterivore and fungivore nematode populations and their nitrogen mineralisation function. Applied Soil Ecology 25:19-35

Fiksel, J., and K. M. Scow.  1983.  The assessment of human exposure and health risks using outputs of environmental fate models, p. 287-307.  In: R.L. Swann,  and A. Eschenroeder (ed.)  Fate of chemicals in the environment.  A.C.S. Symp. Series 255.  American Chemical Society, Washington, D.C.

Fitzgerald, G., K.M. Scow, and J. Hill.  2000.  Fallow season straw and water management effects on methane emissions in California rice.  Global Biogeochemical Cycles 14:767-776.

Fuller, M., D. Mu, and K.M. Scow.  1995.  Biodegradation of trichloroethylene and toluene by indigenous microbial populations in vadose sediments.  Microb. Ecol. 29:311-325.

Fuller, M.E., and K. M. Scow.  1997.  Impacts of trichloroethylene (TCE) and toluene on nitrogen cycling in soil.  Appl. Environ. Microbiol. 63:4015-4019.

Fuller, M.E., and K.M. Scow.  1996.  Effects of toluene on microbial-mediated processes involved in the soil nitrogen cycle.  Microb. Ecol. 32:171-184.

Fuller, M.E., and K.M. Scow.  1997.  Effect of exopolymers on biodegradation of organic compounds by Pseudomonas sp. strains JSA and JS150.  Microb. Ecol. 34:248-253.

Fuller, Gamst, J., P. Moldrup, D.E. Rolston, K.M. Scow, and T. Komatsu M.E., K.M. Scow, S. Lau, and H. Ferris.  1997.  Trichloroethylene and toluene effects on the structure and function of the soil community.  Soil Biol. Biochem.29:75-89.

     Napthalene adsorption kinetics and time-dependent sorption isotherm parameters for four soils. Soil Sci. Soc. Am. J.

Gamst, J., P. Moldrup, D.E. Rolston, T. Olesen, K. Scow, and T. Komatsu. 2003. Comparison of naphthalene diffusion and nonequilibrium adsorption-desorption experiments. Soil Sci. Soc. Am. J. 67:765-777. 

Geisseler, D., W. R. Horwath and K. M. Scow. 2011. Soil moisture and plant residue addition interact in their effect on extracellular enzyme activity.  Pedobiologia 54:71-78.

Gray, J.R., G. Lacrampe-Couloume, D. Gandhi, K. M. Scow, R. D. Wilson, D. M. MacKay, and B. Sherwood Lollar. 2002.  Carbon and hydrogen isotopic fractionation during biodegradation of methyl tert-butyl ether. Environ. Sci.  Technol. 36:1931-1938.

Green, C.T., and K.M. Scow.  2000.  Analysis of phospholipid fatty acids (PLFA) to characterize microbial communities in aquifers. Hydrogeology J. 8:126-141.

Gunapala, N., and K.M. Scow.  1998.  Dynamics of soil microbial biomass and activity in conventional and organic farming systems.  Soil Biol. Biochem. 30:805-816.

Gunapala, N., R.C. Venette, H. Ferris, and K.M. Scow.  1998.  Effects of soil management history on the rate of organic matter decomposition.  Soil Biol. Biochem. 30:1917-1927.

Hanson, J.R., C.E. Ackerman, and K.M. Scow.  1999.  Biodegradation of methyl tert-butyl ether by a bacterial pure culture.  Appl. Environ. Microbiol. 65:4788-4792.

Hanson, J.R., J.L. Macalady, D. Harris, and K.M. Scow.  1999.  Linking toluene degradation with specific microbial populations in soil.  Appl. Environ. Microbiol. 65:5403-5408.

Holloway, J.M., Goldhaber, M.B., Scow, K.M., Drenovsky, R.E.  2009. Spatial and seasonal variations in mercury methylation and microbial community structure in a historic mercury mining area, Yolo County, California. Chemical Geology, 267 (1-2), pp. 85-95. 

Hoyle, B., K.M. Scow, G. Fogg, and J. Darby.  1995.  Effect of carbon:nitrogen ratio on kinetics of phenol biodegradation by Acinetobacter in saturated sand.  Biodegradation 6:283-293.

Hristova, K. R., Schmidt, R., Chakicherla, A. Y., Legler, T. C., Wu, J., Chain, P. S., Scow, K. M., Kane, S. R. 2007. Comparative Transcriptome Analysis of Methylibium petroleiphilum PM1 Exposed to the Fuel Oxygenates Methyl tert-Butyl Ether and Ethanol. Appl. Environ. Microbiol. 73: 7347-7357

Hristova, K., B. Gebreyesus, D. Mackay, and K.M. Scow.  2003.  Naturally occurring bacteria similar to the methyl tert-butyl ether (MTBE)-degrading strain PM1 are present in MTBE-contaminated groundwater.  Appl. Environ. Microbiol. 69:2616-2623.

Hristova, K.R., C.M. Lutenegger, and K.M. Scow.  2001.  Detection and Quantification of MTBE-degrading Strain PM1 by Real-Time TaqMan PCR.  Appl. Environ.  Microbiol. 67: 5154-5160.

Ingels, CA; Scow, KM; Whisson, DA; Drenovsky, RE. 2005. Effects of cover crops on grapevines, yield, juice composition, soil microbial ecology, and gopher activity. Amer. J. Vitic. Enol. 56 (1): 19-29.

Jackson, L.E., F.J. Calderon, K.L. Steenwerth, K.M. Scow, and D.E. Rolston. 2003. Responses of soil microbial processes and community structure to tillage events and implications for soil quality. Geoderma 114:305-317.

Jaffee, B.A., H. Ferris, and K.M. Scow.  1998.  Nematode-trapping fungi in organic and conventional cropping systems.  Phytopath. 88: 344-350.

Johnson, C.R., and K.M. Scow.  1999.  Effect of nitrogen and phosphorus addition on phenanthrene biodegradation in four soils.  Biodegradation 10:43-50.

Johnson, M.J., K.Y. Lee, and K.M. Scow. 2003. DNA fingerprinting reveals links among agricultural crops, soil properties, and the composition of soil microbial communities. Geoderma 114:279-303.

Kane SR, Chakicherla AY, Chain PS, Schmidt R, Shin MW, Legler TC, Scow KM, Larimer FW, Lucas SM, Richardson PM, Hristova KR. 2007. Whole-genome analysis of the methyl tert-butyl ether-degrading beta-proteobacterium Methylibium petroleiphilum PM1. J Bacteriol. 189:1931-45

Kristensen, A.H., K. Henriksen, L. Mortensen, K.M. Scow and P. Moldrup. 2010. Soil Physical Constraints on Intrinsic Biodegradation of Petroleum Vapors in a Layered Subsurface. Vadose Zone Journal 9:137-147

Lau, S.S., M.E. Fuller, H. Ferris, R.C. Venette, and K.M. Scow.  1997.  Development and testing of an assay for soil-ecosystem health using the bacterial-feeding nematode Cruznema tripartitum.  Ecotox. Environ. Safety 36:133-139.

Lundquist, E.J., L.E. Jackson, and K.M. Scow.  1999.  Wet-dry cycles affect dissolved organic carbon in two California agricultural soils.  Soil Biol. Biochem 31:1031-1038.

Lundquist, E.J., L.E. Jackson, C. Johnson, S. Uesugi, and K.M. Scow.  1999. Rapid response of soil microbial communities from conventional, low input, and organic farming systems to a wet/dry cycle.  Soil Biol. Biochem 31:1661-1675.

Lundquist, E.J., L.E. Jackson, K.M. Scow, and C. Hsu.  1999.  Changes in microbial biomass and community composition, and soil carbon and nitrogen pools after incorporation of rye into three California agricultural soils.  Soil Biol. Biochem. 31:221-236.

Macalady JL, McMillan AM, Dickens AF, Tyler SC, Scow KM. (2002)  Population dynamics of type I and II methanotrophic bacteria in rice soils. Environ Microbiol. 4: 148-57.

Macalady, J., M. Fuller, and K.M. Scow.  1998.  Effects of fumigation with metam sodium on soil microbial activity and community structure.  J. Environ. Qual. 27:54-63.

Macalady, J.L., E. Mack, D. Nelson, and K.M. Scow.  2000.  Sediment microbial community structure and mercury methylation in mercury-polluted Clear Lake, CA.  Appl. Environ. Microbiol.  66:1479-1488.

Machulla, G; Bruns, MA; Scow, KM. 2005. Microbial properties of mine spoil materials in the initial stages of soil development. Soil Sci. Soc. Amer. J. 69 (4): 1069-1077.

Mackay, D. M., N. R. de Sieyes, M. D. Einarson, K. P. Feris, A. A. Pappas, I. A. Wood, L. A Jacobson, L. G. Justice, M. N. Noske, J.T. Wilson, C. Adair, and K.M. Scow.  2007. Impact of Ethanol on the Natural Attenuation of MTBE in a Normally Sulfate-Reducing Aquifer.  Environmental Science & Technology 41: 2015-2021.

Mackay, D. M., N. R. de Sieyes, M. D. Einarson, K. P. Feris, A. A. Pappas, I. A. Wood, L. A Jacobson, L. G. Justice, M. N. Noske, K. M. Scow and J. T. Wilson.  2006. Impact of ethanol on the natural attenuation of benzene, toluene and o-xylene in a normally sulfate-reducing aquifer.  Environmental Science & Technology 40: 6123-6130.

Moore, John C., Eric L. Berlow,, David C. Coleman, Peter C. de Ruiter, Quan Dong, Alan Hastings, Nancy Collins Johnson, Kevin S. McCann, Kim Melville, Peter J. Morin, Knute Nadelhoffer, Amy D. Rosemond, David M. Post, John L. Sabo, Kate M. Scow, Michael J. Vanni and Diana H. Wall.  2004.  Detritus, trophic dynamics and biodiversity.  Ecol. Letters 7:584-600.

Morgenroth, E., E.D. Schroeder, D.P.Y. Chang, and K.M. Scow.  1996.  Nutrient limitation in a compost biofilter degrading hexane.  J. Air & Waste Manage. Assoc. 46:300-308.

Mu, D.Y., and K.M. Scow.  1994.  Effect of trichloroethylene (TCE) and toluene concentrations on TCE and toluene biodegradation and the population density of TCE and toluene degraders in soil.  Appl. Environ. Microbiol. 60:2661-2665.

Naas, C., R. Wilson, D. Mackay, and K.M. Scow. 2002. Investigation of spatial distribution of native aerobic MTBE degrading microorganisms: preliminary results. Contam. Soil, Sediment and Water (July/August): 76-79.

Nakatsu, CH; K. Hristova, S. Hanada, X.-Y. Meng, J. R. Hanson, K. M. Scow and Y. Kamagata. 2006.  Methylibium petroleiphilum gen. nov., sp. nov., a novel methyl tert-butyl ether-degrading methylotroph of the Betaproteobacteria. Int J Syst Evol Microbiol 56: 983-989

Nozawa-Inoue, M, M. Jien, MS Hamilton, V Stewart, KM Scow, and KR Hristova. 2008. Quantitative detection of perchlorate-reducing bacteria by real-time PCR targeting the perchlorate reductase gene. Appl Environ. Microb. 74:1941-1944.

Nozawa-Inoue, M; Scow, KM; Rolston, DE. 2005. Reduction of perchlorate and nitrate by microbial communities in vadose soil. Appl. Environ. Microb. 71 (7): 3928-3934.

Okano, Y., K.R. Hristova, C.M. Leutenegger, L.E. Jackson, R.F. Denison, B. Gebreyesus, D. Lebauer, and K.M. Scow. 2004. Application of real-time PCR to study effects of ammonium on population size of ammonia-oxidizing bacteria in soil. Appl. Environ. Microbiol. 70(2):1008-1016.

Pereira, E., H. Chung, K. Scow, M. J. Sadowsky, C. van Kessel, J. Six. 2011. Soil nitrogen transformations under elevated atmospheric CO2 and O3 during the soybean growing season.  Environmental Pollution 159: 401-407.

Potthoff, M; Steenwerth, KL; Jackson, LE, et al. 2006. Soil microbial community composition as affected by restoration practices in California grassland. Soil Biol. Biochem. 38:1851-1860.  

Poudel, D.D., Ferris, H., Klonsky, K, Horwath, W.R., Scow, K.M., van Bruggen, A.H.C., Lanini, W.T, Mitchell, J.P., Temple, S.R.  2001.  The sustainable agriculture farming system project in California's Sacramento Valley. Outlook on Agriculture. 30: 109-116.

Pozos, N; Scow, K; Wuertz, S; Darby, J. 2004. UV disinfection in a model distribution system: biofilm growth and microbial community. Water Res. 38 (13): 3083-3091.

Ramadan, Z., X.H. Song, P.K. Hopke, M.J. Johnson, and K.M. Scow.  2001.  Variable selection in classification of environmental soil samples for partial least square and neural network models.  Anal. Chem. Acta 446:233-244.

Ramadan, Z; Hopke, PK; Johnson, MJ; Scow, KM. 2005. Application of PLS and Back-Propagation Neural Networks for the estimation of soil properties. Chemom. Intell. Lab. Syst. 75 (1): 23-30.

Rillig, M.C., K.M. Scow, J.N. Klironomos, and M.F. Allen.  1997.  Microbial carbon-substrate utilization in the rhizosphere of Gutierrezia sarothrae  grown in elevated atmospheric carbon dioxide.  Soil Biol. Biochem. 29:1387-1394.

Rolston, D.E., A. Felsot, K. Pennell, K.M. Scow, and H. Stroo. 2002. Fate of soil contaminants. In: Lanno, R. (ed), Contaminated Soils: From soil-chemical interactions to ecosystem management. Proceedings of Workshop on Assessing Contaminated Soils, Pellston, MI, 23-27 September 1998. Society of Environmental Toxicology and Chemistry (SETAC), Pensacola, FL, USA. Pp 147-196.

Roßner, U., B. L. Hoyle, and K.M. Scow.  1994.  Effect of carbon:nitrogen ratios on growth kinetics of Acinetobacter johnsonii metabolizing phenol in liquid and saturated sand.  Proc. from Second International Conference on Ground Water Ecology, Atlanta, Georgia, March, 1994.

Schmidt, R., Battaglia, V., Scow, K., Kane, S., Hristova, K.R.  2008. Involvement of a novel enzyme, MdpA, in methyl tert-butyl ether degradation in Methylibium petroleiphilum PM1. Applied and Environmental Microbiology, 74 (21), pp. 6631-6638. 

Schmidt, S. K.,  K. M. Scow, and M. Alexander.  1987.  Kinetics of p-nitrophenol mineralization by a Pseudomonas sp.: effects of second substrates.  Appl. Environ. Microbiol. 53: 2617-2623.

Schmidt, S. K., and K. M. Scow.  1986.  Mycorrhizal fungi on the Galapagos Islands.  Biotropica  18: 236-240.

Schmidt, S.K., and K.M. Scow.  1996.  Use of soil bioreactors and microcosms in bioremediation research, p. 822-829.  In: Hurst, C.J. (ed.) Manual of Environmental Microbiology.  ASM Press, Washington, D.C.

Schmidt, S.K., and K.M. Scow. 2002. Use of bioreactors and microcosms to assess the biodegradation potential of soil, 1049-1056. In: Hurst, C. (ed) Manual of Environmental Microbiology, 2nd Edition. American Society of Microbiology Press, Washington, DC.

Schwartz, E, S.V. Trinh, K.M. Scow, KM.  2002.  Impact of methylene chloride on microorganisms and phenanthrene mineralization in soil.  J. Environ. Qual. 31:144-149.

Schwartz, E., and K.M. Scow.  1999.  Using biodegradation kinetics to measure the availability of aged phenanthrene to bacteria inoculated into soil.  Environ. Toxic. Chem. 18: 1742-1746.

Schwartz, E., and K.M. Scow.  2001.  Repeated inoculation as a strategy for the remediation of low concentrations of phenanthrene in soil.  Biodegradation 12:201-207.

Schwartz, E., S.V. Trinh, and K.M. Scow.  2000.  Measuring growth of a phenanthrene degrading bacterial inoculum in soil with a quantitative competitive polymerase chain reaction method.  FEMS Microb. Ecol. 34:1-7

Scow, K. M.  1982.  Rate of biodegradation, p. 9-1 to 9-85,  In: W.J. Lyman, W.F. Reehl, and D.H. Rosenblatt (ed.)  Handbook of chemical property estimation methods.  McGraw Hill Book Co., New York.

Scow, K. M., and J. Hutson.  1992.  Effect of diffusion and sorption on the kinetics of biodegradation: theoretical considerations.  Soil Sci. Soc. Amer. J. 56:119-127.

Scow, K. M., and M. Alexander.  1992.  Effect of diffusion and sorption on the kinetics of biodegradation: experimental results with synthetic aggregates.  Soil Sci. Soc. Amer. J. 56:128-134.

Scow, K. M., D. M. Li, V. B. Manilal, and M. Alexander.  1990.  Mineralization  of organic compounds at low concentrations by filamentous fungi.  Mycol. Res. 94: 793-798.

Scow, K. M., R. R. Merica, and M. Alexander.  1990.  Kinetic analysis of enhanced biodegradation of carbofuran.  J. Agric. Food Chem. 38: 908-912.

Scow, K. M., S. K. Schmidt, and M. Alexander.  1989.  Kinetics of biodegradation of mixtures of substrates in soil.  Soil Biol. Biochem. 21: 703-708.

Scow, K. M., S. Simkins, and M. Alexander.  1986.  Kinetics of mineralization of organic compounds at low concentrations in soil.  Appl. Environ. Microbiol.  51: 1028-1035.

Scow, K.M.  1987.  Modeling biodegradation in soil.  ICET News 3: 2-3.  (Institute for Comparative and Environmental Toxicology, Cornell University, Ithaca, N.Y.). 

Scow, K.M.  1993.  Effect of sorption-desorption and diffusion processes on the kinetics of biodegradation of organic chemicals in soil, pp 73-114.   In: Linn, D. (ed.) Sorption and Degradation of Pesticides and Organic Chemicals in Soil.  Soil Science Society of America Special Publication 32, Madison WI.

Scow, K.M.  1997. Soil microbial communities and carbon flow in agroecosystems, p. 361-407.  In: Jackson, L.E.(ed.)  Ecology in Agriculture.  Academic Press, N.Y.

Scow, K.M.  2000.  Soil microbiology.  In: Encyclopedia of Microbiology.  Academic Press (in press).

Scow, K.M. and C.R. Johnson.  1997.  Effect of sorption on biodegradation of soil pollutants.  Adv. Agon. 58:1-56

Scow, K.M., and M.R. Werner.  1999.  The soil ecology of cover cropped vineyards, p. 69-79.  In: Ingels, C. (ed.) Cover cropping in vineyards.  University of California Division of Agriculture and Natural Resources.  Publication 3338.  DANR, Oakland, CA.

Scow, K.M., E. Schwartz, M.Johnson, and J.L. Macalady.  2001.  Measurement of microbial diversity.  In: Encylopedia of Biodiversity. 4:177-190. Academic Press, NY.

Scow, K.M., O. Somasco, N. Gunapala, S. Lau, R. Venette, H. Ferris, R. Miller, and C. Shennan.  1994.  Changes in soil fertility and biology during the transition from conventional to low-input and organic farming systems.  Calif. Agric. 48:20-26.

Scow, K.M., S. Fan, C. Johnson, and G.M. Ma. 1994.  Biodegradation of sorbed chemicals in soil.  Environ. Health Perspec. 103:93-95.

Scow, KM; Hicks, KA. 2005. Natural attenuation and enhanced bioremediation of organic contaminants in groundwater. Curr. Opin Biotechnol. 16 (3): 246-253.

Smith, AE; Hristova, K; Wood, I; Mackay, DM; Lory, E; Lorenzana, D; Scow, KM. 2005. Comparison of biostimulation versus bioaugmentation with bacterial strain PM1 for treatment of groundwater contaminated with methyl tertiary butyl ether (MTBE).  Environ. Health Perspec. 113 (3): 317-322.

Son, A., Dosev, D., Nichkovac, M., Mab, Z., Kennedy, I., Scow, K., and Hristova, K. 2007. Quantitative DNA hybridization in solution using magnetic/luminescent core-shell nanoparticles. Anal. Biochem. 370: 186-194

Song, X.H., P.K. Hopke, M. Bruns, D.A. Bossio, and K.M. Scow.  1998.  A fuzzy adaptive resonance theory--supervised predictive mapping neural network applied to the classification of multivariate data.  Chemomet. Intell. Lab. Syst. 41:161-170

Song, X.-H., P.K. Hopke, M.A. Bruns, K. Graham, and K. Scow.  1999.  Pattern recognition of soil samples based on microbial fatty acid contents.  Environ. Sci. Technol. 33: 3524-3530.

Smukler, S., S. Sánchez-Moreno, S.J. Fonte, H. Ferris, K. Klonsky, A.T. O’Geen, K.M. Scow, K.L. Steenwerth, L.E. Jackson. 2010. Biodiversity and multiple ecosystem functions in an organic farmscape Agriculture, Ecosystems & Environment:139: 80-97

Steenwerth KL. Jackson LE. Calderon FJ. Stromberg MR. Scow KM. 2002.  Soil microbial community composition and land use history in cultivated and grassland ecosystems of coastal California. Soil Biology & Biochemistry. 34:1599-1611.

Steenwerth, K.L., Jackson, L.E., Carlise, E.A., Scow, K.M. 2006. Microbial communities of a native perennial bunchgrass do not respond consistently across a gradient of land use intensification. Soil Biology and Biochemistry. 38, 1797-1811.

Steenwerth, K.L., Louise E. Jackson, Francisco J. Calderon, Mark R. Stromberg, and Kate M. Scow.  2003.  Soil microbial community composition and land use history in cultivated and grassland ecosystems of coastal California.  Soil Biol. Biochem. 35:489-500.

Steenwerth, K.L., R.E. Drenovsky, J.J. Lambert, D.A. Kluepfel, K.M. Scow, D.R. Smart. 2008. Soil morphology, depth and grapevine root frequency influence microbial communities in a Pinot noir vineyard. Soil Biol. Biochem 40:1330-1340.

Steenwerth, KL; Jackson, LE; Calderon, FJ; Scow, KM; Rolston, DE. 2005. Response of microbial community composition and activity in agricultural and grassland soils after a simulated rainfall. Soil Biol. Biochem. 37 (12): 2249-2262.

Sudarshana, P., J.R. Hanson, and K.M. Scow.  1999.  Application of random amplified polymorphic DNA (RAPD) method for characterization of soil microbial communities, p. 223-231. In: Scow et al. (eds) Integrated assessment of ecosystem health.  Lewis Publishers, Boca Raton, FL.

Suddick, E., K. M. Scow, W. R. Horwath, L. E. Jackson, D. R. Smart, J Mitchell, J. Six 2010. The Potential for California Agricultural Crop Soils to Reduce Greenhouse Gas Emissions: A Holistic Evaluation. Advances in Agronomy 107: 123-162

Temple, S.R., D.B. Friedman, O. Somasco, H. Ferris, K. Scow and K. Klonsky. 1994.  An interdisciplinary, experiment station-based participatory comparison of alternative crop management systems for California's Sacramento Valley. Amer. J. Altern. Agric. 9:64-71.

Tipton, D.K., D.E. Rolston, and K.M. Scow. 2003. Transport and biodegradation of perchlorate in soils. J. Environ. Qual. 32:40-46.

Tomich, TP, S Brodt, H Ferris, R Galt, W Horwath, E Kebreab, J Leveau, D Liptzin, M Lubell, P Merel, R Michelmore T Rosenstock, K Scow, J Six, N Williams, and L Yang. 2011. “Agroecology: A review from a global change perspective.” Annual Review of Environment and Resources 36:193-222.

Watanabe, N; Schwartz, E; Scow, KM; Young, TM. 2005. Relating desorption and biodegradation of phenanthrene to SOM structure characterized by quantitative pyrolysis GC-MS. Environ. Sci.  Technol. 39 (16): 6170-6181.

Wemmer, C., and K. Scow.  1977.  Communication in the Felidae with emphasis on scent marking and contact patterns, p. 749-766.  In: T. Sebeok (ed.)  How animals communicate.  Indiana University Press, Bloomington.

Wemmer, C., M. Von Ebers, and K. Scow.  1976.  An analysis of the chuffing vocalization in the polar bear.  J. Zool., Lond. 180: 425-439.

Wilson, R.D., D.M.  Mackay,  and K.M. Scow.  2001.  In situ MTBE biodegradation supported by diffusive  oxygen  release.  Environ. Sci.  Technol. 36:190-199.

Zornoza, R., C. Guerrero, J. Mataix-Solera, K.M. Scow, V. Arcenegui, J. Mataix-Beneyto. 2008.  Near infrared spectroscopy for determination of various physical, chemical and biochemical properties in Mediterranean soils. Soil Biology and Biochemistry, 40 (7), pp. 1923-1930. 

Zornoza, R., Guerrero, C., Mataix-Solera, J., Scow, K.M., Arcenegui, V., Mataix-Beneyto, J.  2009. Changes in soil microbial community structure following the abandonment of agricultural terraces in mountainous areas of Eastern Spain. Applied Soil Ecology, 42 (3), pp. 315-323.